ADL: convert planner pdb file to 3d

yangyc@bii-sg.org yangyc at bii-sg.org
Fri Feb 18 23:37:06 PST 2005


dear all,

i have a question which is not really about autodock...

i downloaded some small molecule pdb files from chemIDplus from NIH, but
found that all the pdb files are planner. To be detailed, the z-axis
values are all 0.

i tried to use the Dundee PRODRG2 Server to convert the planner pdb file
into 3D, but not sure if the converted results are reliable. so if anyone
have tried any other softwares for such 2D-to-3D convertion of chemical
structures, could you please tell me about that?

thanks a lot!

cheers,

yuchen



More information about the autodock mailing list