ADL: peptide-protein docking

Carsten Baldauf carsten.baldauf at biotec.tu-dresden.de
Mon Jan 16 09:21:32 PST 2006


dear all//
my aim is to design peptide-ligands to a protein receptor. the peptide 
ligand has about 12 residues and contains
 non-natural amino acids. until now, i obtain not very encouraging 
results using Autodock. has anyone suggestions
for tweaking the input or other computational approaches to dock a 
peptide-like compound to a protein.
thanks in advance//
carsten




-- 
dr carsten baldauf
biotechnologisches zentrum der tu dresden
http://www.biotec.tu-dresden.de/pisabarro
http://www.biotec.tu-dresden.de/~carstenb




More information about the autodock mailing list