ADL: sodium force field parameters

Joshua M. Sadler j.sadler at umbc.edu
Wed Aug 8 14:36:02 PDT 2007


Hello,

I am attempting to dock a ligand into a recpetor site that has a bound
sodium ion. Since sodium is not included in the standard set of atoms in
autodock4, I need to add these manually. My question is, where do I need
to look in order to find the energy well depth (epsii) and atomic
solvation (Solpar) parameters?

Thank you in advance.

J.Sadler


-- 
Joshua M. Sadler
Doctoral Candidate
Dept. Chemistry and Biochemistry
1000 Hilltop Circle
Baltimore, MD 21250
Lab: (410)-455-8683
FAX: (410)-455-2608



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