ADL: Using autodock tool on Vista

Wilfred Li wilfred at sdsc.edu
Tue Feb 12 12:53:57 PST 2008


It works, in 32 and 64 bit mode. What PDB ID did you try? Is it a
standard PDB format?

You can test using

Read ... PDB @ RCSB.org ... 1hpx. 



Regards,

Wilfred


-----Original Message-----
From: autodock-bounces at scripps.edu [mailto:autodock-bounces at scripps.edu]
On Behalf Of Siew Yit Yong
Sent: Tuesday, February 12, 2008 11:48 AM
To: autodock at scripps.edu
Subject: ADL: Using autodock tool on Vista

Hi all, I installed everything that is needed to run autodock but it
seems
like the MGL tools are not working on my computer. I tried to read some
pdb
files but the none of them show on the screen. I tried to centre the
molecule by typing N, put on different colours but nothing works. Does
anyone have any luck using MGL tools on vista?

Thanks in advance.

Regards,
Sue

On Feb 12, 2008 6:12 AM, Wilfred Li <wilfred at sdsc.edu> wrote:

> Use the picker and the control key to set the center.
>
> Cheers,
>
> Wilfred
>
>
> -----Original Message-----
> From: autodock-bounces at scripps.edu
[mailto:autodock-bounces at scripps.edu]
> On Behalf Of Czuee Morey
> Sent: Saturday, February 09, 2008 8:39 PM
> To: autodock at scripps.edu
> Subject: ADL: Center macromolecule in workspace
>
> Hi,
> Is there any tool to centre the macromolecule in ADT like in other
> softwares. I'm having a problem analyzing the docking results- can't
see
> any conformations besides the input one when I play the conformations.
> I'm
> following the procedure in the manual 'Using ADT with Autodock'
>
>
> Czuee Morey,
> Msc. Biotechnology,
> IIT-Bombay
>
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