ADL: Autogrid4 error
horam at email.uc.edu
Tue Jan 15 07:54:40 PST 2008
I am trying to do rigid-flex docking with Autodock4. I
am doing all the steps as in the tutorial(UsingAutoDock4WithADT_1.4.5b.pdf I downloaded from website) I prepared the pdbqt file for macromolecule using
File-> Save-> Write PDBQT.
I have ignored - Preparing the flexible residue file exercise from the tutorial(since I am not doing flex-flex docking). I also prepared ligand pdbqt file.
I get the the following error when I try to run autorid4:
ERROR: Unknown receptor type: "O"
-- Add parameters for it to the parameter library first!
I am attaching that error file for details. Has anyone encountered similar problem?
I really appreciate any help with this.
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