Florenci V. Gonzalez
fgonzale at qio.uji.es
Tue Jan 29 09:50:22 PST 2008
At 18:00 29/01/2008, you wrote:
>Florenci V. Gonzalez wrote:
>> when I run autogrid I get this error:
>>/usr/local/bin/autogrid4: ERROR: can't find or open receptor PDBQT
>>/usr/local/bin/autogrid4: ERROR: Unsuccessful completion.
>>I do not know why it cannot find that file when it is there in that
>>--- ADL: AutoDock List --- http://autodock.scripps.edu/mailing_list ---
>Probably your environment is setup so that the current directory
>is not in your path.
>Type this to see:
>#for me, here the result
>--> echo $PATH
>#i truncated it for sanity sake...
>#the first '.' represents the current directory
>#if you are using a csh, you could add the current directory this way->
>set path = ( . $path)
Thanks Ruth. Now is working but I have other problems related to the grid:
I do not see any AutoGpf Ligand widget after selecting the ligand
when I set map types, and then when I run the Autodock an error appears:
Even Number of User-specified Grid Points = 0 x-points
Adding the Central Grid Point makes: 1 x-points
/usr/local/bin/autodock4: ERROR: insufficient grid points.
/usr/local/bin/autodock4: Unsuccessful Completion.
Why says insufficient grid points if I selected enough of them in
the grid box?
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