ADL: Query about Pdbqs creation of receptor file of a tetrameric protein

Rajiv Ranjan Singh rajssai at
Thu Mar 6 07:33:15 PST 2008

hello to all ADL users.
I have some queries regarding autodock.
for preparation of receptor file of a tetrameric protein i downloaded pdb file
and then removed water molecule and ligands thereafter whether i should
minimize the energy of tetrameric protein before preparation of pdbqs file of
the tetrameric protein or not please let me know.

--Rajiv Ranjan Singh
Molecular Sciences Laboratory
National Institute of Immunology
Aruna Asaf Ali Marg
New Delhi -110067

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