ADL: ADT problems on Mac OS 10.5 and Leopard

Jha, Babal JHAB at ccf.org
Mon Mar 10 11:31:36 PDT 2008


Hi George,

I had the same problem when I tried on my macbook (intell mac os X
10.5). Can you let me know if it works for you and can you write me in
detail you got rid of the problem.
Thanks in advance.

With regards

Jha

-----Original Message-----
From: autodock-bounces at scripps.edu [mailto:autodock-bounces at scripps.edu]
On Behalf Of George Tzotzos
Sent: Monday, March 10, 2008 2:15 PM
To: autodock at scripps.edu
Subject: Re: ADL: ADT problems on Mac OS 10.5 and Leopard

Hi Sargis,

Many thanks. But some additional clarification is still needed,  
particularly with regard to the order of doing things:

1. I assume one needs to install, as a first step, Python 2.5. The  
Leopard version I have (10.5.2) ships with Python 2.4.

2. Is the next step the replacement of the Leopard X11 by the Tiger  
version? If yes, does one follow the procedure given in
http://aaroniba.net/articles/x11-leopard.html
or it would simply suffice to replace the Leopard /usr/X11R6  with  
that from another machine with Mac OS X 10.4 as you suggest?

3. Finally, does one install MGL Tools from the binary installer or  
from the source?

Your clarifications/suggestions etc would be of great help.

All the best

George

On Mar 10, 2008, at 6:38 PM, Sargis Dallakyan wrote:

> lakshmi ganesan wrote:
>> Hi all,
>>
>> I am a newbie to autodock. I downloaded and installed MGLTools ver  
>> Mac OS X
>> 10.5.0 - Intel on my new macbook. Howver I encountered the
>> error 
>>
:"_THE_PROCESS_HAS_FORKED_AND_YOU_CANNOT_USE_THIS_COREFOUNDATION_FUNCTI
>> ONALITY__YOU_MUST_EXEC_() to debug"
>>
>> Then I found the instruction on How to get ADT started on Leopard and
>> proceeded to downlaod and install OS X 10.4 - Intel version.  
>> However, the
>> installation aborts saying that a higher version of MGLTools is  
>> present and
>> it cannot proceed. Then  I did the following:
>
> Thanks for bringing up the Leopard issue. The how-to applies to  
> version 1.4.6 of
> MGLTools. I retracted it since I no longer provide support for that  
> version.  My
> apologies for any confusion this may have caused.
>
> To fix your problem you need to reinstall the latest version of  
> MGLTools
> (1.5.0). Then start adt from a command line (/Library/MGLTools/1.5.0/ 
> bin/adt)
> and ignore _THE_PROCESS... messages. Also, try to bring back Tiger's  
> X11 to
> Leopard: http://aaroniba.net/articles/x11-leopard.html
>
> I had a chance to work on a Laptop with Mac OS X 10.5.2 last week.  
> There are
> some changes done in this version of Lepoard that causes  
> ImportError: The
> _imaging C module is not installed in addition to _THE_PROCESS...  
> and ADT fails
> to start. Reinstalling Python Imaging Library (PIL) from source did  
> not fix the
> problem; PIL was causing segmentation fault and gdb gave me no clue  
> as to why.
>
> The only option left for me was to downgrade X11. In my case (no  
> Mac's installer
> CDs), the only way I was able to get Tiger's X11 on Leopard was by  
> coping
> /usr/X11R6 from another machine with Mac OS X 10.4 installed.
>
>> 1. I went ahead and deleted the MGLtools folder from te  
>> applications folder.
>>
>> 2. Also, I deleted the MGLtools folder form the /library directory  
>> from the
>> terminal window.
>> 3. I have verified that there is no folder called mgltools on the  
>> machine.
>>
>> Yet, when I yry to install the lower version, the installation  
>> fails saying
>> that a higher version exists.
>>
>> How do I uninstall MGLtools for Mac OS X 10.5.0 - Intel from my  
>> macbook?
>
> Note that neither MGLTools nor any other application installed with  
> Mac
> installer has uninstaller:
> http://guides.macrumors.com/Uninstalling_Applications_in_Mac_OS_X
>
> Besides removing /Library/MGLTools and /Application/MGLTools-* you  
> can also
> remove MGLTools_*.pkg from /Library/Receipts/.
>
> You can also use our "low-tech" tarball installer. It has no GUI, no
> installation check and no administrator password is needed. It can be
> uninstalled by simply deleting the folder it creates.
>
> Hope this helps,
> Sargis
>
>
>
> ________________________________________________
> --- ADL: AutoDock List  --- http://autodock.scripps.edu/mailing_list  
> ---

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