ADL: AutoDock Vina with Flex residues!

Warren Menezes wmenezes at ccc.edu
Fri Apr 24 10:04:01 PDT 2009


Dear Friends,
I have now performed several dockings using the latest version of AutoDock Vina (Great Program!!), in which the active receptor site is set as rigid.  I would like to prepare a pdpqt file with flexible residues.  I have identified the residues to flex, but I would like to know the procedure to prepare the input flex-residues file using any program such as,  ADT, Pymol, or even MS Word, Thanks!
 
With Best Regards
Warren
Chicago
USA
 


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