ADL: Bug - Urgent Help

Mahmoud A. A. Ibrahim m.ibrahim1982 at yahoo.com
Mon Apr 27 10:03:50 PDT 2009


Dear Autodock Users
I have installed autodock tools 1.5.2 (and also 1.5.4) and when I call runadt or runPmv it gives me the following error:
mbdxhmi2 at slater:~/scratch/MyPrograms> runPmv 
Run PMV from  /home/slater/mbdxhmi2/scratch/MyPrograms/python2.6/lib/python2.6/site-packages/MGLToolsPckgs/Pmv
decoder jpeg not available
Traceback (most recent call last):
  File "/home/slater/mbdxhmi2/scratch/MyPrograms/python2.6/lib/python2.6/site-packages/MGLToolsPckgs/Pmv/__init__.py", line 343, in runPmv
    title=title, withShell= not interactive, verbose=False)
  File "/home/slater/mbdxhmi2/scratch/MyPrograms/python2.6/lib/python2.6/site-packages/MGLToolsPckgs/Pmv/moleculeViewer.py", line 300, in __init__
    verbose=verbose, trapExceptions=trapExceptions)
  File "/home/slater/mbdxhmi2/scratch/MyPrograms/python2.6/lib/python2.6/site-packages/MGLToolsPckgs/ViewerFramework/VF.py", line 347, in __init__
    verbose=verbose)
  File "/home/slater/mbdxhmi2/scratch/MyPrograms/python2.6/lib/python2.6/site-packages/MGLToolsPckgs/ViewerFramework/VFGUI.py", line 265, in __init__
    cnf = {"addScenarioButton": False})
  File "/home/slater/mbdxhmi2/scratch/MyPrograms/python2.6/lib/python2.6/site-packages/MGLToolsPckgs/DejaVu/Viewer.py", line 654, in __init__
    inheritXform=0)
  File "/home/slater/mbdxhmi2/scratch/MyPrograms/python2.6/lib/python2.6/site-packages/MGLToolsPckgs/DejaVu/Geom.py", line 166, in __init__
    apply( Common2d3dObject.__init__, (self, name, check), kw)
  File "/home/slater/mbdxhmi2/scratch/MyPrograms/python2.6/lib/python2.6/site-packages/MGLToolsPckgs/DejaVu/Common2d3dObject.py", line 101, in __init__
    apply( self.Set, (check, 0), kw)
  File "/home/slater/mbdxhmi2/scratch/MyPrograms/python2.6/lib/python2.6/site-packages/MGLToolsPckgs/DejaVu/Geom.py", line 682, in Set
    self.vertexSet = datamodel.VertexSet( v, s )
  File "/home/slater/mbdxhmi2/scratch/MyPrograms/python2.6/lib/python2.6/site-packages/MGLToolsPckgs/DejaVu/datamodel.py", line 373, in __init__
    if len(self.vertices) > 0: self.vertices.BoundingBox()
TypeError: __len__() should return an int
Please include this Traceback in your bug report. Help --> Report a Bug in PMV/ADT.
hit enter to continue

I need an urgent help, please.
Thanks in advance
M. Ibrhaim



      


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