ADL: flexible residue

Ravi Sharma ravi_pharma_biotech at
Sun Jun 14 05:33:41 PDT 2009

I am doing docking using Autodock4 (windows version). I am using HIV -RT(reverse transcriptase) as receptor.
I need help regarding the preparation of flexible residue file.i want to know which residue should i select to make flexible residue for flexible docking?. 

2. Problem : - How to set grd properties, i mean what is the criteria to set grid dimensions,spacing, and center.?

Please reply soon

Ravi Sharma 
B-Pharmacy (Reg.Pharmacist)

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