ADL: Method of covalent docking

Nok :p justmin28 at
Sun Sep 19 22:11:53 PDT 2010



Thanks you very much for your time to suggest my problem.


Now I try to redock of isocitratelyase with its ligand (pdb code = 1f8m). In binding pocket. I found that this ligand bind with its target that I call "covalent docking".


I tired to delete this bond in order to separate ligand out. And then I try to do step by step of ADT 4.2. I think my method is wrong. Please suggest me. 


Thanks in advances


Best regards,





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