ADL: (no subject)

Saba Ferdous saba.bsbi154 at iiu.edu.pk
Fri Oct 28 07:20:15 PDT 2011


increase Grid Spacing...
hope it will work


On Fri, Oct 28, 2011 at 3:07 PM, ohm prakash <ohmprakash at gmx.com> wrote:

> Dear Friends,
>  In Autodock is it not possible to assign grid size to more than 64A (I
> mean the number of points in x, y , z dimension). Whenver I try a docking
> with value above 64, it works well untill 'Run Autodock' then gets stuck
> midway the process. Is there anything that can be done about it. (I am
> trying a small peptide (12 residues) docking so grid area has to be big
> enough to accomodate the peptide within).I am using AutoDock 4.2.
> ________________________________________________
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>



-- 
Saba Ferdous
Research Scholar (M. Phil)
National Center for Bioinformatics
Quaid-e-Azam University, Islamabad
Pakistan


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