ADL: large energy at pocket

aman36 amnakhan369 at
Sat Oct 6 05:11:37 PDT 2012


i have got a problem please help

in my docking results

the receptor binds to ligand at pocket by setting the grid points to
50,50,50 and rest parameters are default
  but  the binding energy is very *large, positive energy.*

when i set the grid box to 60 60 60 , the specific binding is not achieved, 

please anybody help in this  how to get negative energy with binding at


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