ADL: protein-RNA docking

ANTOINE FORTUNE antoine.fortune at ujf-grenoble.fr
Fri Dec 19 06:00:41 PST 2014


no. The algorythm won't converge anymore. 
I tryed with only 60 tors and it fails. 

600 torsions -> use dynamics or simulated annealing,or wathever but a docking tool 

Antoine 
----- Mail original -----

De: "f namazifar" <f.namazifar at sci.ui.ac.ir> 
À: autodock at scripps.edu 
Envoyé: Vendredi 19 Décembre 2014 14:32:05 
Objet: ADL: protein-RNA docking 

Hi. I want to use autodock4.2 for protein-RNA docking. Can I change 
MAX-TORS of constants.h in src from 32 to 600 ? 
Regards. 







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