ADL: autodock Digest, Vol 124, Issue 15

suniba shuaib suniba88chemistry at gmail.com
Sat Dec 27 03:45:47 PST 2014


Hello i am having a similar problem. I have windows 8 OS (32 bit)  and my
autogrid eror is :-

unsuccessful completion

i can't find parameter file pathname ':\C Program'
 I have followed all tutorials and have done each step carefull. following
the tutorial with "hsg1" and ind (as mentioned).
i do not understand what i am missing or is it a general problem with
windows. Shall i try Linux?

On Fri, Dec 26, 2014 at 1:30 AM, <autodock-request at scripps.edu> wrote:

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> Today's Topics:
>
>    1. Re:  ??:  Error in autogrid running (Xue Cai)
>    2.  ??: ??:  Error in autogrid running (zcqcau)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Thu, 25 Dec 2014 23:29:55 +0800
> From: Xue Cai <ceciliacaixue at gmail.com>
> Subject: Re: ADL: ??:  Error in autogrid running
> To: autodock at scripps.edu
> Message-ID: <D3ACA7C5-8F40-44ED-82ED-5A6F1D4C5CCA at gmail.com>
> Content-Type: text/plain; charset=utf-8
>
> ???
> > On Dec 25, 2014, at 11:27 PM, zcqcau <zcqcau at gmail.com> wrote:
> >
> >
> >   ???????
> >   ?????????????
> >
> >   -------- ???? --------
> >   ???Re: ADL: Error in autogrid running
> >   ????Xue Cai
> >   ????autodock at scripps.edu
> >   ???
> >
> >     ??????????????
> >     ????????
> >> On Dec 25, 2014, at 10:50 PM, Chunqing Zhao wrote:
> >>
> >> ????????????15851810118
> >>
> >> On Thu, Dec 25, 2014 at 9:31 PM, Xue Cai wrote:
> >>
> >>> ???
> >>>
> >>> ?????
> >>> ????????cscc???????????
> >>> ?????????
> >>> ?????????????
> >>>
> >>> ??
> >>> ?????????
> >>>
> >>>> On Dec 25, 2014, at 7:39 PM, Chunqing Zhao wrote:
> >>>>
> >>>> ???????????????
> >>>> ????
> >>>> ??????
> >>>>
> >>>> On Thu, Dec 25, 2014 at 5:33 PM, Xue Cai
> >>> wrote:
> >>>>
> >>>>> Hi?
> >>>>> This is the error that I encountered when running AutoGrid.
> >>>>> My system is MAC OS X.
> >>>>> It says:
> >>>>>
> >>>>> Traceback (most recent call last):
> >>>>> File "/Library/MGLTools/1.5.6/MGLToolsPckgs/ViewerFramework/VF.py",
> >>> line
> >>>>> 898, in tryto
> >>>>> result = command( *args, **kw )
> >>>>> File
> >>>>>
> >>>
> >
>  "/Library/MGLTools/1.5.6/MGLToolsPckgs/AutoDockTools/autostartCommands.py"
> >     ,
> >>>>> line 964, in doit
> >>>>> ps = subprocess.Popen(args)
> >>>>> File "/Library/MGLTools/1.5.6/lib/python2.5/subprocess.py", line 594,
> >>> in
> >>>>> __init__
> >>>>> errread, errwrite)
> >>>>> File "/Library/MGLTools/1.5.6/lib/python2.5/subprocess.py", line
> >     1097,
> >>>>> in _execute_child
> >>>>> raise child_exception
> >>>>> OSError: [Errno 2] No such file or directory
> >>>>>
> >>>>>
> >>>>> what should I do?
> >>>>> Thanks!
> >>>>> Merry Christmas!
> >>>>>
> >>>>> Xue Cai
> >>>>> ________________________________________________
> >>>>> --- ADL: AutoDock List --- http://autodock.scripps.edu/mailing_list
> >>> ---
> >>>>
> >>>>
> >>>>
> >>>>
> >>>> --
> >>>>
> >>>> Chunqing Zhao /???
> >>>>
> >>>> Nanjing Agricultural University
> >>>>
> >>>> Office : +86-025-84399063
> >>>>
> >>>> Home: +86-158-5181-0118
> >>>>
> >>>> Chinese Scholar supported by CSCC @ UC Berkeley
> >>>> ________________________________________________
> >>>> --- ADL: AutoDock List --- http://autodock.scripps.edu/mailing_list
> >     ---
> >>>
> >>>
> >>> ________________________________________________
> >>> --- ADL: AutoDock List --- http://autodock.scripps.edu/mailing_list
> ---
> >>>
> >>
> >>
> >>
> >> --
> >>
> >> Chunqing Zhao /???
> >>
> >> Nanjing Agricultural University
> >>
> >> Office : +86-025-84399063
> >>
> >> Home: +86-158-5181-0118
> >>
> >> Chinese Scholar supported by CSCC @ UC Berkeley
> >> ________________________________________________
> >> --- ADL: AutoDock List --- http://autodock.scripps.edu/mailing_list ---
> >     ________________________________________________
> >     --- ADL: AutoDock List --- http://autodock.scripps.edu/mailing_list
> ---
> > ________________________________________________
> > --- ADL: AutoDock List  --- http://autodock.scripps.edu/mailing_list ---
>
>
>
>
> ------------------------------
>
> Message: 2
> Date: Thu, 25 Dec 2014 23:50:45 +0800
> From: zcqcau <zcqcau at gmail.com>
> Subject: ADL: ??: ??:  Error in autogrid running
> To: autodock at scripps.edu
> Message-ID: <549c3264.3129460a.2c49.ffff86b9 at mx.google.com>
> Content-Type: text/plain; charset="utf-8"
>
>
>    Ok
>    ?????????????
>
>    -------- ???? --------
>    ???ADL: ??: Error in autogrid running
>    ????zcqcau
>    ????autodock at scripps.edu
>    ???
>
>      ???????
>      ?????????????
>      -------- ???? --------
>      ???Re: ADL: Error in autogrid running
>      ????Xue Cai
>      ????autodock at scripps.edu
>      ???
>      ??????????????
>      ????????
>      > On Dec 25, 2014, at 10:50 PM, Chunqing Zhao wrote:
>      >
>      > ????????????15851810118
>      >
>      > On Thu, Dec 25, 2014 at 9:31 PM, Xue Cai wrote:
>      >
>      >> ???
>      >>
>      >> ?????
>      >> ????????cscc???????????
>      >> ?????????
>      >> ?????????????
>      >>
>      >> ??
>      >> ?????????
>      >>
>      >>> On Dec 25, 2014, at 7:39 PM, Chunqing Zhao wrote:
>      >>>
>      >>> ???????????????
>      >>> ????
>      >>> ??????
>      >>>
>      >>> On Thu, Dec 25, 2014 at 5:33 PM, Xue Cai
>      >> wrote:
>      >>>
>      >>>> Hi?
>      >>>> This is the error that I encountered when running AutoGrid.
>      >>>> My system is MAC OS X.
>      >>>> It says:
>      >>>>
>      >>>> Traceback (most recent call last):
>      >>>> File
> "/Library/MGLTools/1.5.6/MGLToolsPckgs/ViewerFramework/VF.py",
>      >> line
>      >>>> 898, in tryto
>      >>>> result = command( *args, **kw )
>      >>>> File
>      >>>>
>      >>
>
>  "/Library/MGLTools/1.5.6/MGLToolsPckgs/AutoDockTools/autostartCommands.py"
>      ,
>      >>>> line 964, in doit
>      >>>> ps = subprocess.Popen(args)
>      >>>> File "/Library/MGLTools/1.5.6/lib/python2.5/subprocess.py", line
> 594,
>      >> in
>      >>>> __init__
>      >>>> errread, errwrite)
>      >>>> File "/Library/MGLTools/1.5.6/lib/python2.5/subprocess.py", line
>      1097,
>      >>>> in _execute_child
>      >>>> raise child_exception
>      >>>> OSError: [Errno 2] No such file or directory
>      >>>>
>      >>>>
>      >>>> what should I do?
>      >>>> Thanks!
>      >>>> Merry Christmas!
>      >>>>
>      >>>> Xue Cai
>      >>>> ________________________________________________
>      >>>> --- ADL: AutoDock List ---
> http://autodock.scripps.edu/mailing_list
>      >> ---
>      >>>
>      >>>
>      >>>
>      >>>
>      >>> --
>      >>>
>      >>> Chunqing Zhao /???
>      >>>
>      >>> Nanjing Agricultural University
>      >>>
>      >>> Office : +86-025-84399063
>      >>>
>      >>> Home: +86-158-5181-0118
>      >>>
>      >>> Chinese Scholar supported by CSCC @ UC Berkeley
>      >>> ________________________________________________
>      >>> --- ADL: AutoDock List ---
> http://autodock.scripps.edu/mailing_list
>      ---
>      >>
>      >>
>      >> ________________________________________________
>      >> --- ADL: AutoDock List ---
> http://autodock.scripps.edu/mailing_list ---
>      >>
>      >
>      >
>      >
>      > --
>      >
>      > Chunqing Zhao /???
>      >
>      > Nanjing Agricultural University
>      >
>      > Office : +86-025-84399063
>      >
>      > Home: +86-158-5181-0118
>      >
>      > Chinese Scholar supported by CSCC @ UC Berkeley
>      > ________________________________________________
>      > --- ADL: AutoDock List --- http://autodock.scripps.edu/mailing_list
> ---
>      ________________________________________________
>      --- ADL: AutoDock List --- http://autodock.scripps.edu/mailing_list
> ---
>      ________________________________________________
>      --- ADL: AutoDock List --- http://autodock.scripps.edu/mailing_list
> ---
>
>
> ------------------------------
>
> ________________________________________________
> --- ADL: AutoDock List  ---
> http://www.scripps.edu/pub/olson-web/doc/autodock/ ---
>
> End of autodock Digest, Vol 124, Issue 15
> *****************************************
>


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