ADL: Blind docking or local docking

Paul Rigor paul.rigor at uci.edu
Thu Feb 13 20:11:17 PST 2014


Hi,

If you're searching the entire protein surface, then that is blind docking.

See:
http://autodock.scripps.edu/faqs-help/faq/can-autodock-be-used-for-blind-docking

Best,
Paul
 On Feb 13, 2014 7:51 PM, "Hemendra Pal Singh Dhaked" <hemendrapsd at gmail.com>
wrote:

> Dear all
> i am using AutoDock4.2. i have large size of protein for docking. To cover
> entire surface of protein if i increase the of grid size upto 170 *170*170
> with grid spacing of 0.375. such docking will be Blind docking or local
> docking.
> please tell me.
>
> Thanks
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