[Pmv] How to change the atom color scheme

Michel Sanner sanner at scripps.edu
Fri Apr 7 11:51:39 PDT 2006


Sargis Dallakyan wrote:

>Hi Jean,
>
>The easiest way to do this is to edit Pmv/pmvPalettes.py, and change 
>"'H':(0.,1.,1.)" in AtomElements into "'H':(0.,0.,0.)". Alternatively, 
>through the GUI, select hydrogens and use Color-->Choose Color.
>
>Hope this helps,
>Sargis
>  
>
This solution will always make your hydrogen atoms white.
if you need to do this only once you can use select-> select From 
String, type H* in the Atom type in and then click on Add
This will select all hydrogen atoms
The color->Choose Color, check the line, ot any other geometry you want 
to re-color and click on the white button in the color chooser.

-- 

-----------------------------------------------------------------------
   o
  /    Michel F. Sanner Ph.D.            The Scripps Research Institute
o      Associate Professor               Department of Molecular Biology
  \                                      10550 North Torrey Pines Road
   o   Tel. (858) 784-2341               La Jolla, CA 92037
  /    Fax. (858) 784-2860
o     sanner at scripps.edu                 http://www.scripps.edu/~sanner
-----------------------------------------------------------------------




More information about the Pmv mailing list